Chen J, Shen L, Wu T, Yang Y (2024) Unraveling the significance of AGPAT4 for the pathogenesis of endometriosis via a multi-omics approach. Hum Genet 143:1163–1174

Article  PubMed  PubMed Central  Google Scholar 

Chlenski A, Cohn SL (2010) Modulation of matrix remodeling by SPARC in neoplastic progression. Semin Cell Dev Biol 21:55–65

Article  PubMed  Google Scholar 

Chuang HH, Huang CG, Hsu JF, Chuang LP, Huang YS, Li HY, Lee LA (2024) Weight status, autonomic function, and systemic inflammation in children with obstructive sleep apnea. Int J Mol Sci. https://doi.org/10.3390/ijms25168951

Article  PubMed  PubMed Central  Google Scholar 

Coxon L, Demetriou L, Vincent K (2024) Current developments in endometriosis-associated pain. Cell Rep Med 5:101769

Article  PubMed  PubMed Central  Google Scholar 

de Souza RJ, Brollo LCS, Carrerette FB, Villela NR, Oliveira MAP (2024) Challenges in measuring sleep quality among women with endometriosis: a comparison of two questionnaires. Sleep Med 114:250–254

Article  PubMed  Google Scholar 

Facchin F, Buggio L, Roncella E, Somigliana E, Ottolini F, Dridi D, Roberto A, Vercellini P (2021) Sleep disturbances, fatigue and psychological health in women with endometriosis: a matched pair case-control study. Reprod Biomed Online 43:1027–1034

Article  PubMed  Google Scholar 

Frizell E, Liu SL, Abraham A, Ozaki I, Eghbali M, Sage EH, Zern MA (1995) Expression of SPARC in normal and fibrotic livers. Hepatology 21:847–854

PubMed  Google Scholar 

Gazzinelli-Guimaraes PH, Dulek B, Swanson P, Lack J, Roederer M, Nutman TB (2024) ’Single-cell molecular signature of pathogenic T helper subsets in type 2-associated disorders in humans. JCI Insight 9:e177720

Article  PubMed  PubMed Central  Google Scholar 

Henlon Y, Panir K, McIntyre I, Hogg C, Dhami P, Cuff AO, Senior A, Moolchandani-Adwani N, Courtois ET, Horne AW, Rosser M, Ott S, Greaves E (2024) Single-cell analysis identifies distinct macrophage phenotypes associated with prodisease and proresolving functions in the endometriotic niche. Proc Natl Acad Sci U S A 121:e2405474121

Article  PubMed  PubMed Central  Google Scholar 

Huang W, Ramsey KM, Marcheva B, Bass J (2011) Circadian rhythms, sleep, and metabolism. J Clin Invest 121:2133–2141

Article  PubMed  PubMed Central  Google Scholar 

Irwin MR (2015) Why sleep is important for health: a psychoneuroimmunology perspective. Annu Rev Psychol 66:143–172

Article  PubMed  Google Scholar 

Ishikura IA, Hachul H, Pires GN, Tufik S, Andersen ML (2020) The relationship between insomnia and endometriosis. J Clin Sleep Med 16:1387–1388

Article  PubMed  PubMed Central  Google Scholar 

Kitchen DB, Decornez H, Furr JR, Bajorath J (2004) Docking and scoring in virtual screening for drug discovery: methods and applications. Nat Rev Drug Discov 3:935–949

Article  PubMed  Google Scholar 

Langenbach F, Handschel J (2013) Effects of dexamethasone, ascorbic acid and β-glycerophosphate on the osteogenic differentiation of stem cells in vitro. Stem Cell Res Ther 4:117

Article  PubMed  PubMed Central  Google Scholar 

Lempesis IG, Georgakopoulou VE, Reiter RJ, Spandidos DA (2024) A mid-pandemic night’s dream: melatonin, from harbinger of anti-inflammation to mitochondrial savior in acute and long COVID-19 (review). Int J Mol Med 53:28

Article  PubMed  PubMed Central  Google Scholar 

Leuenberger J, Kohl Schwartz AS, Geraedts K, Haeberlin F, Eberhard M, von Orellie S, Imesch P, Leeners B (2022) Living with endometriosis: comorbid pain disorders, characteristics of pain and relevance for daily life. Eur J Pain 26:1021–1038

Article  PubMed  PubMed Central  Google Scholar 

Ligthart S, Vaez A, Võsa U, Stathopoulou MG, de Vries PS, Prins BP, Van der Most PJ, Tanaka T, Naderi E, Rose LM, Wu Y, Karlsson R, Barbalic M, Lin H, Pool R, Zhu G, Macé A, Sidore C, Trompet S, Mangino M, Sabater-Lleal M, Kemp JP, Abbasi A, Kacprowski T, Verweij N, Smith AV, Huang T, Marzi C, Feitosa MF, Lohman KK, Kleber ME, Milaneschi Y, Mueller C, Huq M, Vlachopoulou E, Lyytikäinen LP, Oldmeadow C, Deelen J, Perola M, Zhao JH, Feenstra B, Amini M, Lahti J, Schraut KE, Fornage M, Suktitipat B, Chen WM, Li X, Nutile T, Malerba G, Luan J, Bak T, Schork N, Del Greco MF, Thiering E, Mahajan A, Marioni RE, Mihailov E, Eriksson J, Ozel AB, Zhang W, Nethander M, Cheng YC, Aslibekyan S, Ang W, Gandin I, Yengo L, Portas L, Kooperberg C, Hofer E, Rajan KB, Schurmann C, den Hollander W, Ahluwalia TS, Zhao J, Draisma HHM, Ford I, Timpson N, Teumer A, Huang H, Wahl S, Liu Y, Huang J, Uh HW, Geller F, Joshi PK, Yanek LR, Trabetti E, Lehne B, Vozzi D, Verbanck M, Biino G, Saba Y, Meulenbelt I, O’Connell JR, Laakso M, Giulianini F, Magnusson PKE, Ballantyne CM, Hottenga JJ, Montgomery GW, Rivadineira F, Rueedi R, Steri M, Herzig KH, Stott DJ, Menni C, Frånberg M, St Pourcain B, Felix SB, Pers TH, Bakker SJL, Kraft P, Peters A, Vaidya D, Delgado G, Smit JH, Großmann V, Sinisalo J, Seppälä I, Williams SR, Holliday EG, Moed M, Langenberg C, Räikkönen K, Ding J, Campbell H, Sale MM, Chen YI, James AL, Ruggiero D, Soranzo N, Hartman CA, Smith EN, Berenson GS, Fuchsberger C, Hernandez D, Tiesler CMT, Giedraitis V, Liewald D, Fischer K, Mellström D, Larsson A, Wang Y, Scott WR, Lorentzon M, Beilby J, Ryan KA, Pennell CE, Vuckovic D, Balkau B, Concas MP, Schmidt R, Mendes de Leon CF, Bottinger EP, Kloppenburg M, Paternoster L, Boehnke M, Musk AW, Willemsen G, Evans DM, Madden PAF, Kähönen M, Kutalik Z, Zoledziewska M, Karhunen V, Kritchevsky SB, Sattar N, Lachance G, Clarke R, Harris TB, Raitakari OT, Attia JR, van Heemst D, Kajantie E, Sorice R, Gambaro G, Scott RA, Hicks AA, Ferrucci L, Standl M, Lindgren CM, Starr JM, Karlsson M, Lind L, Li JZ, Chambers JC, Mori TA, Ejcn de Geus AC, Heath NG, Martin J, Auvinen BM, de Buckley AJM, Craen M, Waldenberger K, Strauch T, Meitinger RJ, Scott M, McEvoy M, Beekman C, Bombieri PM, Ridker KL, Mohlke NL, Pedersen AC, Morrison DI, Boomsma JB, Whitfield DP, Strachan A, Hofman P, Vollenweider F, Cucca MR, Jarvelin JW, Jukema TD, Spector A, Hamsten T, Zeller AG, Uitterlinden M, Nauck V, Gudnason L, Qi H, Grallert IB, Borecki JI, Rotter W, März PS, Wild ML, Lokki M, Boyle V, Salomaa M, Melbye JG, Eriksson JF, Wilson BP, Becker DM, Worrall BB, Gibson G, Krauss RM, Ciullo M, Zaza G, Wareham NJ, Oldehinkel AJ, Palmer LJ, Murray SS, Pramstaller PP, Bandinelli S, Heinrich J, Ingelsson E, Deary IJ, Mägi R, Vandenput L, van der Harst P, Desch KC, Kooner JS, Ohlsson C, Hayward C, Lehtimäki T, Shuldiner AR, Arnett DK, Beilin LJ, Robino A, Froguel P, Pirastu M, Jess T, Koenig W, Loos RJF, Evans DA, Schmidt H, Smith GD, Slagboom PE, Eiriksdottir G, Morris AP, Psaty BM, Tracy RP, Nolte IM, Boerwinkle E, Visvikis-Siest S, Reiner AP, Gross M, Bis JC, Franke L, Franco OH, Benjamin EJ, Chasman DI, Dupuis J, Snieder H, Dehghan A, Alizadeh BZ (2018) Genome analyses of >200,000 individuals identify 58 loci for chronic inflammation and highlight pathways that link inflammation and complex disorders. Am J Hum Genet 103:691–706

Article  PubMed  PubMed Central  Google Scholar 

Liu B, Yang L, Zhu X, Li H, Zhu P, Wu J, Lu T, He L, Liu N, Meng S, Zhou L, Ye B, Tian Y, Fan Z (2019) Yeats4 drives ILC lineage commitment via activation of Lmo4 transcription. J Exp Med 216:2653–2668

Article  PubMed  PubMed Central  Google Scholar 

Morris GM, Lim-Wilby M (2008) Molecular docking. Methods Mol Biol 443:365–382

Article  PubMed  Google Scholar 

Park W, Jang H, Kim HS, Park SJ, Lim W, Song G, Park S (2024) Therapeutic efficacy and anti-inflammatory mechanism of baicalein on endometriosis progression in patient-derived cell line and mouse model. Phytomedicine 130:155469

Article  PubMed  Google Scholar 

Pascual-Pasto G, Castillo-Ecija H, Unceta N, Aschero R, Resa-Pares C, Gómez-Caballero A, Vila-Ubach M, Muñoz-Aznar O, Suñol M, Burgueño V, Gomez-Gonzalez S, Sosnik A, Ibarra M, Schaiquevich P, de Álava E, Tirado OM, Mora J, Carcaboso AM (2022) SPARC-mediated long-term retention of nab-paclitaxel in pediatric sarcomas. J Control Release 342:81–92

Article  PubMed  Google Scholar 

Ramu I, Buchholz SM, Patzak MS, Goetze RG, Singh SK, Richards FM, Jodrell DI, Sipos B, Ströbel P, Ellenrieder V, Hessmann E, Neesse A (2019) SPARC dependent collagen deposition and gemcitabine delivery in a genetically engineered mouse model of pancreas cancer. EBioMedicine 48:161–168

Article  PubMed  PubMed Central  Google Scholar 

Reel PS, Reel S, Pearson E, Trucco E, Jefferson E (2021) Using machine learning approaches for multi-omics data analysis: a review. Biotechnol Adv 49:107739

Article  PubMed  Google Scholar 

Sekharan S, Morokuma K (2011) Why 11-cis-retinal? Why not 7-cis-, 9-cis-, or 13-cis-retinal in the eye? J Am Chem Soc 133:19052–19055

Article  PubMed  PubMed Central  Google Scholar 

The Lancet (2024) Endometriosis: addressing the roots of slow progress. Lancet (London, England), 404(10460), 1279. https://doi.org/10.1016/S0140-6736(24)02179-2

Välimäki N, Jokinen V, Cajuso T, Kuisma H, Taira A, Dagnaud O, Ilves S, Kaukomaa J, Pasanen A, Palin K, Heikinheimo O, Bützow R, Aaltonen LA, Karhu A (2023) Inherited mutations affecting the SRCAP complex are central in moderate-penetrance predisposition to uterine leiomyomas. Am J Hum Genet 110:460–474

Article  PubMed  PubMed Central  Google Scholar 

VanBuren W, Feldman M, Shenoy-Bhangle AS, Sakala MD, Young S, Chamie LP, Giudice L, Hindman NM, Tong A, Rabban JT, Yano M, Kilcoyne A, Dave HD, Poder L, Kho RM, Burnett TL, Khan Z, King C, Shen L, Colak C, Burk KS, Andrieu PIC, Franco IVP, Glanc P, Kielar AZ, Taffel MT, Kania LM, Bonde A, Pectasides M, Arif-Tiwari H, Laifer-Narin S, Nicola R, Jha P (2024) Radiology state-of-the-art review: endometriosis imaging interpretation and reporting. Radiology 312:e233482

Article  PubMed  Google Scholar 

Vandereyken K, Sifrim A, Thienpont B, Voet T (2023) Methods and applications for single-cell and spatial multi-omics. Nat Rev Genet 24:494–515

Article  PubMed